Google scholar arxiv informatics ads IJAIS publications are indexed with Google Scholar, NASA ADS, Informatics et. al.

Call for Paper

-

August Edition 2021

International Journal of Applied Information Systems solicits high quality original research papers for the August 2021 Edition of the journal. The last date of research paper submission is July 15, 2021.

Paithumbase - Biometrical Traits based Query System for Studying Mungbean [Vigna radiata (L. ) Wilczek] Phenomics

N. Senthil, J. Murukarthick, M. Pandiyan, A. Karthikeyan, M. Sudha, M. Raveendran, P. Jayamani, S. Kalaiselvi, P. Nagarajan Published in Information Systems

International Journal of Applied Information Systems
Year of Publication: 2012
© 2012 by IJAIS Journal
10.5120/ijais12-450819
Download full text
  1. N Senthil, J Murukarthick, M Pandiyan, A Karthikeyan, M Sudha, M Raveendran, P Jayamani, S Kalaiselvi and P Nagarajan. Article: Paithumbase - Biometrical Traits based Query System for Studying Mungbean [Vigna radiata (L.) Wilczek] Phenomics. International Journal of Applied Information Systems 4(10):36-39, December 2012. BibTeX

    @article{key:article,
    	author = "N. Senthil and J. Murukarthick and M. Pandiyan and A. Karthikeyan and M. Sudha and M. Raveendran and P. Jayamani and S. Kalaiselvi and P. Nagarajan",
    	title = "Article: Paithumbase - Biometrical Traits based Query System for Studying Mungbean [Vigna radiata (L.) Wilczek] Phenomics",
    	journal = "International Journal of Applied Information Systems",
    	year = 2012,
    	volume = 4,
    	number = 10,
    	pages = "36-39",
    	month = "December",
    	note = "Published by Foundation of Computer Science, New York, USA"
    }
    

Abstract

Paithumbase is an established database for identifying the phenotypic variations of the mungbean germplasm accessions preserved in the National Pulses Research Centre, Tamil Nadu Agricultural University. This database provides information on both quantitative and qualitative traits of the mungbean germplasm. The database architecture was built with a GUI interface, developed in PHP and HTML as front end and MySQL as the backend language. It is promising that this database will provide valuable biological and bioinformatics resources for plant physiologists and geneticists to dissect the major phenotypic traits to develop highly adapted plant material to sustain future breeding programs. The plant breeders can easily decide the choice of the parental lines involved in the varietal improvement programs by using this database. Paithumbase is available for public access at http://www. tnaugenomics. com/paithumbase/.

Reference

  1. Upadhyaya HD, Yadav D, Dronavalli N, Gowda CLL and Singh S. 2010. "Mini core germplasm collections for infusing genetic diversity in plant breeding programs". Electronic Journal of Plant Breeding, 1(4):1294-1309.
  2. Badaloo G H, Domaingue R and Ramdoyal K. 1998. "A critical review of parental choice and cross prediction techniques in the msiri sugar cane breeding programme AMAS," Food and Agricultural Research Council, Reduit, Mauritius.
  3. Conlin D C. 2006. "Introduction to Databases on The Web",http://www. access. qbuilt. com/html/dbdriven_web_sites. html.
  4. Henry A. 2009. "Using Google Earth for Internet GIS [MSc Dissertation] Geographical Information Science," Institute of Geography, School of Geosciences.
  5. Cosentino C. 2000. "Essential PHP for Web Professionals", Prentice Hall Computer Books, 1 edition. pp. 205.
  6. Murukarthick J, Sreedevi G S, Senthil, N, Raveendran, M, et al. 2011. A web accessible resource for investigating cassava phenomics and genomics information. Bioinformation 6(10): 391-392.
  7. Murukarthick J, Senthil N, Raveendran M, Prabhakaran P, et al. 2011. Biogen Base – An Interactive Maize Database for Phenomics Platform. International Journal of Computer Application. 2: 56–61.
  8. Yamazaki Y and Jaiswal P. 2005. Biological ontologies in rice databases. An introduction to the activities in Gramene and Oryzabase. Plant Cell Physiol 46: 63-8. [Pmid: 15659431]
  9. Okuno K. 1998. "Proceedings of the international symposium on rice germplasm evaluation and enhancement", p. 101.
  10. Heilmann C. 2007. Beginning JavaScript with DOM Scripting and Ajax, APress.
  11. Fabrice Grassein, Irène Till-Bottraud, Sandra Lavorel. "Plant resource-use strategies: the importance of phenotypic plasticity in response to a productivity gradient for two subalpine species," Annals of Botany. June 21, 2010. pp. 154
  12. Masaru Takeya, Fukuhiro Yamasaki and Shihomi Uzuhashi. "NIASGBdb: NIAS Genebank databases for genetic resources and plant disease information," Nucleic Acids Research. 39(14): October 2010, doi:10. 1093/nar/gkq916. 2011.
  13. The ECPGR Vigna Database. Austrian Agency for Health and Food Safety (AGES) Wieningerstrasse 8. A-4020 Linz, Austria http://www. genbank. at/en/ecpgr-vigna. html.
  14. Abdullah Kahraman, Andrey Avramov and Lyubomir G. Nashev. "PhenomicDB: a multi-species genotype/phenotype database for comparative phenomics," Bioinformatics, 21(3): 418-420. doi: 10. 1093/bioinformatics/bti010. 2005.

Keywords

Mungbean germplasm, MySQL, Paithumbase, PHP, TNAU Genomics